Browse some of the recent publications that have featured
our BenchMark™ FBS.
The X-linked acrogigantism-associated
gene gpr101 is a regulator of early embryonic
development and growth in zebrafish
Trivellin, G., Tirosh, A., Hernández-Ramírez, L. C., Gupta, T.,
Tsai-Morris, C. H., Faucz, F. R., … & Stratakis, C. A. (2020).
The X-linked acrogigantism-associated gene gpr101 is a regulator
of early embryonic development and growth in
zebrafish. Molecular and Cellular Endocrinology, 111091.
Luminescence properties and cell uptake analysis of Y2O3:
Eu, Bi nanophosphors for bio-imaging applications
Chávez-García, D., Sengar, P., Juarez-Moreno, K., Flores, D. L.,
Calderón, I., Barrera, J., & Hirata, G. A. (2020). Luminescence
properties and cell uptake analysis of Y2O3: Eu, Bi nanophosphors
for bio-imaging applications. Journal of Materials Research
and Technology.
Cell-Type-Specific Gene Regulatory Networks Underlying
Murine Neonatal Heart Regeneration at Single-Cell
Resolution
Wang, Z., Cui, M., Shah, A. M., Tan, W., Liu, N., Bassel-Duby,
R., & Olson, E. N. (2020). Cell-Type-Specific Gene Regulatory
Networks Underlying Murine Neonatal Heart Regeneration at
Single-Cell Resolution. Cell Reports, 33(10),
108472.
Retinoic Acid Promotes Endothelial Cell Cycle Early G1
State to Enable Human Hemogenic Endothelial Cell
Specification
Qiu, J., Nordling, S., Vasavada, H. H., Butcher, E. C., &
Hirschi, K. K. (2020). Retinoic Acid Promotes Endothelial Cell
Cycle Early G1 State to Enable Human Hemogenic Endothelial Cell
Specification. Cell Reports, 33(9), 108465.
A Novel DNA-Binding Domain in Sterile Alpha Motif
Domain-Containing 9 Important for Antiviral Function
Coronado, J. (2020). A Novel DNA-Binding Domain in Sterile
Alpha Motif Domain-Containing 9 Important for Antiviral
Function (Doctoral dissertation, The University of Texas
Health Science Center at San Antonio).
Phosphodiesterase 2A and 3B variants are associated with
primary aldosteronism
Rassi-Cruz, M., Maria, A. G., Faucz, F. R., London, E., Vilela,
L. A., Santana, L. S., … & Chambô, J. L. (2020).
Phosphodiesterase 2A and 3B variants are associated with primary
aldosteronism. Endocrine-Related Cancer, 1(aop).
Nanotopography Enhances Dynamic Remodeling of Tight
Junction Proteins through Cytosolic Liquid Complexes
Huang, X., Shi, X., Hansen, M. E., Setiady, I., Nemeth, C. L.,
Celli, A., … & Desai, T. A. (2020). Nanotopography Enhances
Dynamic Remodeling of Tight Junction Proteins through Cytosolic
Liquid Complexes. ACS nano, 14(10), 13192-13202.
Protocol for Single-Nucleus Transcriptomics of Diploid
and Tetraploid Cardiomyocytes in Murine Hearts
Cui, M., & Olson, E. N. (2020). Protocol for Single-Nucleus
Transcriptomics of Diploid and Tetraploid Cardiomyocytes in
Murine Hearts. STAR Protocols, 100049.
pH-Gated Succinate Secretion Regulates Muscle Remodeling
in Response to Exercise
Reddy, A., Bozi, L. H., Yaghi, O. K., Mills, E. L., Xiao, H.,
Nicholson, H. E., … & Ferreira, J. C. (2020). pH-Gated
Succinate Secretion Regulates Muscle Remodeling in Response to
Exercise. Cell, 183(1), 62-75.
Disruption of VirB6 paralogs in Anaplasma phagocytophilum
attenuates its growth
Crosby, F.
L., Munderloh, U. G., Nelson, C. M., Herron, M. J., Lundgren, A.
M., Xiao, Y. P., … & Barbet, A. F. (2020). Disruption of VirB6
paralogs in Anaplasma phagocytophilum attenuates its
growth. Journal of Bacteriology, 202(23).
DNA hypomethylation promotes transposable element
expression and activation of immune signaling in renal cell
cancer
de Cubas, A. A., Dunker, W., Zaninovich, A., Hongo, R. A.,
Bhatia, A., Panda, A., … & Rathmell, W. K. (2020). DNA
hypomethylation promotes transposable element expression and
activation of immune signaling in renal cell cancer. JCI
Insight, 5(11).
Optical Recordings of Action Potentials and Voltage
Sensing Domains
Banks,
Q. (2020). Optical Recordings of Action Potentials and
Voltage Sensing Domains (Doctoral dissertation).
Compressive Stimulation Enhances Ovarian Cancer
Proliferation, Invasion, Chemoresistance, and Mechanotransduction
via CDC42 in a 3D Bioreactor
Novak, C. M.,
Horst, E. N., Lin, E., & Mehta, G. (2020). Compressive
Stimulation Enhances Ovarian Cancer Proliferation, Invasion,
Chemoresistance, and Mechanotransduction via CDC42 in a 3D
Bioreactor. Cancers, 12(6), 1521.
Fusion of lysosomes to plasma membrane initiates
radiation-induced apoptosis
Ferranti, C. S., Cheng, J., Thompson, C., Zhang, J., Rotolo, J.
A., Buddaseth, S., … & Kolesnick, R. N. (2020). Fusion of
lysosomes to plasma membrane initiates radiation-induced
apoptosis. Journal of Cell Biology, 219(4).
A Novel Human Skin Tissue Model To Study Varicella-Zoster
Virus and Human Cytomegalovirus
Lloyd, M. G., Smith, N. A., Tighe, M., Travis, K. L., Liu, D.,
Upadhyaya, P. K., … & Moffat, J. F. (2020). A Novel Human Skin
Tissue Model To Study Varicella-Zoster Virus and Human
Cytomegalovirus. Journal of Virology, 94(22).
Examination of clinically-derived p210 BCR/ABL1 RhoGEF
mutations in a murine bone marrow transplantation model of
CML
Ciccarelli, B. T., Hu, T., Wang, Q., Kim, J. J., & Whitehead, I.
P. (2020). Examination of clinically-derived p210 BCR/ABL1 RhoGEF
mutations in a murine bone marrow transplantation model of
CML. Leukemia Research, 97, 106440.
Identification of CD4+ T Cell-Stimulating Plasmodium
yoelii Epitopes Via in
vivo Immunopeptidomics
VanPelt, M. J. (2020). Identification of CD4+ T
Cell-Stimulating Plasmodium yoelii Epitopes Via in vivo
Immunopeptidomics (Doctoral dissertation, Drexel
University).
Visible/Near-Infrared Emitting, Garnet-Based
Paramagnetic-Persistent Luminescent Nanocrystals for Two-Photon
Bioimaging
Sengar, P., Flores, D. L., Chauhan, K., Can-Uc, B.,
Juarez-Moreno, K., Contreras, O. E., … & Hirata, G. A. (2020).
Visible/Near-Infrared Emitting, Garnet-Based
Paramagnetic-Persistent Luminescent Nanocrystals for Two-Photon
Bioimaging. Crystal Growth & Design, 20(9),
5880-5889.
Co-culture Systems of Drug-Treated Acute Myeloid Leukemia
Cells and T Cells for In Vitro and In Vivo Study
Li, Y., Su, R., & Chen, J. (2020). Co-culture Systems of
Drug-Treated Acute Myeloid Leukemia Cells and T Cells for In
Vitro and In Vivo Study. STAR protocols, 1(2),
100097.
Cathelicidin-mediated lipopolysaccharide signaling via
intracellular TLR4 in colonic epithelial cells evokes CXCL8
production
Holani, R., Babbar, A., Blyth, G. A., Lopes, F., Jijon, H.,
McKay, D. M., … & Cobo, E. R. (2020). Cathelicidin-mediated
lipopolysaccharide signaling via intracellular TLR4 in colonic
epithelial cells evokes CXCL8 production. Gut
microbes, 12(1), 1785802.
Processing Human Thymic Tissue for Single Cell
RNA-Seq
Le, J., Ha, V. L., Luong, A., & Parekh, C. (2020). Processing
Human Thymic Tissue for Single Cell RNA-Seq. STAR
protocols, 1(2), 100090.
Camouflaged, activatable and therapeutic tandem
bionanoreactors for breast cancer theranosis
Chauhan, K., Sengar, P., Juarez-Moreno, K., Hirata, G. A., &
Vazquez-Duhalt, R. (2020). Camouflaged, activatable and
therapeutic tandem bionanoreactors for breast cancer
theranosis. Journal of Colloid and Interface
Science, 580, 365-376.
A fast, simple, and cost-effective method of expanding
patient-derived xenograft mouse models of pancreatic ductal
adenocarcinoma
Liu,
Z., Ahn, M. H. Y., Kurokawa, T., Ly, A., Zhang, G., Wang, F., …
& Liss, A. S. (2020). A fast, simple, and cost-effective method
of expanding patient-derived xenograft mouse models of pancreatic
ductal adenocarcinoma. Journal of Translational
Medicine, 18(1), 1-12.
Identification of CD4+ T Cell-Stimulating Plasmodium
yoelii Epitopes Via in
vivo Immunopeptidomics
VanPelt, M. J. (2020). Identification of CD4+ T
Cell-Stimulating Plasmodium yoelii Epitopes Via in vivo
Immunopeptidomics (Doctoral dissertation, Drexel
University).
m 6 A Modification Prevents Formation of Endogenous
Double-Stranded RNAs and Deleterious Innate Immune Responses
during Hematopoietic Development
Biancon, G., Nelakanti, R., Lobben, K., Kudo, E., Liu, W.,
Ardasheva, A., … & Dura, B. (2020). m 6 A Modification Prevents
Formation of Endogenous Double-Stranded RNAs and Deleterious
Innate Immune Responses during Hematopoietic
Development. Immunity, 52, 1-15.
Methodology for in vitro Assessment of Human T Cell
Activation and Blockade
Podojil, J. R.,
Ifergan, I., Chiang, M. Y., Meeks, J. J., & Miller, S. D. (2020).
Methodology for in vitro Assessment of Human T Cell Activation
and Blockade. Bio-protocol, 10(11), e3644-e3644.
Dynamic Transcriptional Responses to Injury of
Regenerative and Non-regenerative Cardiomyocytes Revealed by
Single-Nucleus RNA Sequencing
Cui, M., Wang, Z., Chen, K., Shah, A. M., Tan, W., Duan, L., …
& Bassel-Duby, R. (2020). Dynamic Transcriptional Responses to
Injury of Regenerative and Non-regenerative Cardiomyocytes
Revealed by Single-Nucleus RNA Sequencing. Developmental
cell.
Maintaining immunogenicity of blood stage and sexual
stage subunit malaria vaccines when formulated in
combination
Parzych, E. M., Miura, K., Long, C. A., & Burns Jr, J. M. (2020).
Maintaining immunogenicity of blood stage and sexual stage
subunit malaria vaccines when formulated in
combination. PloS one, 15(4), e0232355.
Electrospun Fibers and Sorbents as a Possible Basis for
Effective Composite Wound Dressings
Álvarez-Suárez,
A. S., Dastager, S. G., Bogdanchikova, N., Grande, D.,
Pestryakov, A., García-Ramos, J. C., … & Paz-González, J. A.
(2020). Electrospun Fibers and Sorbents as a Possible Basis for
Effective Composite Wound
Dressings. Micromachines, 11(4), 441.
Nanotoxicological study of downconversion
Y2O3:Eu3+luminescent nanoparticles functionalized with folic acid
for cancer cells bioimaging
Chávez‐García, D., Juarez‐Moreno, K., Calderón‐Osuna, I.,
Navarro, P., & Hirata, G. A. (2020). Nanotoxicological study of
downconversion Y2O3: Eu3+ luminescent nanoparticles
functionalized with folic acid for cancer cells
bioimaging. Journal of Biomedical Materials Research Part B:
Applied Biomaterials.
Real-Time Analysis of Individual Ebola Virus
Glycoproteins Reveals Pre-Fusion, Entry-Relevant Conformational
Dynamics
Durham, N. D.,
Howard, A. R., Govindan, R., Senjobe, F., Fels, J. M., Diehl, W.
E., … & Munro, J. B. (2020). Real-Time Analysis of Individual
Ebola Virus Glycoproteins Reveals Pre-Fusion, Entry-Relevant
Conformational Dynamics. Viruses, 12(1), 103.
A Transcriptional Switch Governing Fibroblast Plasticity
Underlies Reversibility of Chronic Heart Disease
Alexanian, M., Przytycki, P. F., Micheletti, R., Padmanabhan, A.,
Ye, L., Travers, J. G., … & Linares-Saldana, R. (2020). A
Transcriptional Switch Governing Fibroblast Plasticity Underlies
Reversibility of Chronic Heart Disease. bioRxiv.
β-L-1-[5-(E-2-Bromovinyl)-2-(hydroxymethyl)-1,3-dioxolan-4-yl)]
uracil (L-BHDU) effectiveness against varicella-zoster virus and
herpes simplex virus type 1 depends on thymidine kinase
activity
De, C., Liu, D., Depledge, D., Breuer, J., Singh, U. S.,
Hartline, C., … & Moffat, J. F. (2020).
β-L-1-[5-(E-2-Bromovinyl)-2-(hydroxymethyl)-1, 3-dioxolan-4-yl)]
uracil (L-BHDU) effectiveness against varicella-zoster virus and
herpes simplex virus type 1 depends on thymidine kinase
activity. bioRxiv.
β-L-1-[5-(E-2-Bromovinyl)-2-(Hydroxymethyl)-1,
3-Dioxolan-4-yl)] Uracil (L-BHDU) Inhibits Varicella Zoster Virus
Replication by Depleting the Cellular dTTP Pool
De, C., Liu, D., Singh, U. S., Chu, C. K., & Moffat, J. F.
(2020). β-L-1-[5-(E-2-Bromovinyl)-2-(Hydroxymethyl)-1,
3-Dioxolan-4-yl)] Uracil (L-BHDU) Inhibits Varicella Zoster Virus
Replication by Depleting the Cellular dTTP
Pool. bioRxiv.
Super-resolution visualization of distinct stalled and
broken replication fork structures
Whelan, D. R., Lee, W. T. C., Marks, F., Kong, Y. T., Yin, Y., &
Rothenberg, E. (2020). Super-resolution visualization of distinct
stalled and broken replication fork structures. bioRxiv.
Mitochondrial Complex II In Intestinal Epithelial Cells
Regulates T-cell Mediated Immunopathology
Fujiwara, H., Mathew, A. V., Kovalneko, I., Pal, A., Lee, H. J.,
Peltier, D., … & Sun, Y. (2020). Mitochondrial Complex II In
Intestinal Epithelial Cells Regulates T-cell Mediated
Immunopathology. bioRxiv.
A Multi-Omics Interpretable Machine Learning Model
Reveals Modes of Action of Small Molecules
Patel-Murray,
N. L., Adam, M., Huynh, N., Wassie, B. T., Milani, P., &
Fraenkel, E. (2020). A Multi-Omics Interpretable Machine Learning
Model Reveals Modes of Action of Small Molecules. Scientific
reports, 10(1), 1-14.
Distinct Roles of Tumor-Associated Mutations in
Collective Cell Migration
Lee, R. M., Vitolo, M. I., Losert, W., & Martin, S. S. (2020).
Distinct Roles of Tumor-Associated Mutations in Collective Cell
Migration. bioRxiv.
Fusion of lysosomes to plasma membrane initiates
radiation-induced apoptosis
Ferranti, C. S., Cheng, J., Thompson, C., Zhang, J., Rotolo, J.
A., Buddaseth, S., … & Kolesnick, R. N. (2020). Fusion of
lysosomes to plasma membrane initiates radiation-induced
apoptosis. Journal of Cell Biology, 219(4).
Metabolic
Diversity in Human Non-Small Cell Lung Cancer
Cells
Boroughs,
L., Ko, B., Sudderth, J., McMillan, E. A., Girard, L., Peyton,
M., … & Sekine, I. Metabolic Diversity in Human Non-Small Cell
Lung Cancer Cells.
Sideroflexin 4 affects Fe-S cluster biogenesis, iron
metabolism, mitochondrial respiration and heme biosynthetic
enzymes
Paul, B. T.,
Tesfay, L., Winkler, C. R., Torti, F. M., & Torti, S. V. (2019).
Sideroflexin 4 affects Fe-S cluster biogenesis, iron metabolism,
mitochondrial respiration and heme biosynthetic
enzymes. Scientific Reports, 9(1), 1-13.
Discovery of small molecules for the reversal of T cell
exhaustion
Marro, B. S., Zak, J., Zavareh, R. B., Teijaro, J. R., Lairson,
L. L., & Oldstone, M. B. (2019). Discovery of small molecules for
the reversal of T cell exhaustion. Cell
reports, 29(10), 3293-3302.
Proteasome inhibitor-induced modulation reveals the
spliceosome as a specific
Huang,
H. H., Ferguson, I. D., Thornton, A. M., Lam, C., & Lin, Y. H. T.
Proteasome inhibitor-induced modulation reveals the spliceosome
as a specific. Biol Chem, 293, 16751-16760.
IL-12 Blocks Tfh Cell Differentiation during Salmonella
Infection, thereby Contributing to Germinal Center
Suppression
Elsner, R. A., & Shlomchik, M. J. (2019). IL-12 Blocks Tfh Cell
Differentiation during Salmonella Infection, thereby Contributing
to Germinal Center Suppression. Cell reports, 29(9),
2796-2809.